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Presentations for Program:: Exploring the utility and limits of target enrichment methods to study polyploidy and reticulate evolution

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SessionDate/TimeLocationTitleTypeAuthorsKeywords

Tuesday, July 28th

Tuesday, July 28th, 10:00 am to 1:30 pm · /
Colloquium: Exploring the utility and limits of target enrichment methods to study polyploidy and reticulate evolution
Presiding: Diego Morales-Briones, University of Minnesota
July 28th 10:00 am/Introduction
0002July 28th 10:15 am/Analysis of paralogs in target enrichment data pinpoints multiple ancient allopolyploidy events in Alchemilla s.l. (Rosaceae)Colloquium PresentationsMorales-Briones, Diego; Gehrke, Berit; Huang, Chien-Hsun; Liston, Aaron; Ma, Hong; Marx, Hannah; Tank, David; Yang, Ya.Alchemilla
allopolyploidy
Gene tree discordance
Hyb-Seq
hybridization
Orthology inference
Paralogs
Rosaceae
Target Enrichment
Whole-genome duplication
0003July 28th 10:30 am/Polyploidy complicates resolution of evolutionary relationships in Tibouchina s.s. (Melastomataceae)Colloquium PresentationsJantzen, Johanna; Freitas Oliveira, Ana Luiza; Guimaraes, Paulo; Soltis, Douglas; Soltis, Pamela.polyploidy
Target Enrichment
phylogenomics
Melastomataceae
0004July 28th 10:45 am/Phasing alleles improves phylogenetic network inference with allopolyploidsColloquium PresentationsTiley, George; Crowl, Andrew; Crowl, Andrew; Sessa, Emily; Burleigh, Gordon.phasing
polyploidy
Multispecies Coalescent
networks
Dryopteris
Target Enrichment
0005July 28th 11:00 am/A phylogenomic investigation into polyploidy and cryptic diversity in the true blueberries (Vaccinium section Cyanococcus)Colloquium PresentationsCrowl, Andrew; Crowl, Andrew; Tiley, George; Fritsch, Peter; Manos, Paul.Alleles
Angiosperm353
Ericaceae
hybridization
HybSeq
phasing
polyploidy
Target Enrichment
Vaccinium
0006July 28th 11:15 am/Targeted long reads from herbarium specimens enable to identify allopolyploidization events of arctic/subarctic Silene sect. PhysolychnisColloquium PresentationsQuatela, Anne-Sophie; Cangren, Patrik; De Boer, Hugo; Bacon, Christine; Oxelman, Bengt.long read sequencing
herbarium specimens
Silene section Physolychnis
allopolyploidization
Target Enrichment
0007July 28th 11:30 am/Assessing the importance of hybridization in the diversification of Anacampseros (Anacampserotaceae, Caryophyllales) in the Cape Floristic Region using targeted sequence capture dataColloquium PresentationsMoore, Abigail; Edwards, Erika.Caryophyllales
Portullugo
Portulacineae
target capture
hybridization
reticulate evolution
Anacampseros
Cape Floristic Region
0008July 28th 11:45 am/Testing hypothesized reticulate evolution in the Cornales using targeted enrichment dataColloquium PresentationsThomas, Shawn; Liu, Xiang; Cummings, Amanda; Pokorny, Lisa; Xiang, Jenny; Leebens-Mack, Jim.phylogenomics
Target Enrichment
reticulate evolution
Angiosperm353
July 28th 12:00 pm/Break
0010July 28th 12:30 pm/Strategies for assessing phylogenomic conflict and testing hybridization, with an example from HeucheraColloquium PresentationsFolk, Ryan.hybridization
methods
phylogenomics
chloroplast capture
0011July 28th 12:45 pm/Phylogenomics Yields New Insight Into Relationships Within Vernonieae (Asteraceae)Colloquium PresentationsSiniscalchi, Carolina; Loeuille, Benoit; Mandel, Jennifer; Pirani, José Rubens.Compositae
Hyb-Seq
phylogeny
target capture
0012July 28th 1:00 pm/
Canceled
How complex can a complex be? Leveraging target enrichment methods to resolve the evolution of Eurasian wood ferns (Dryopteris affinis agg., Dryopteridaceae)
Colloquium PresentationsTesto, Weston; Kessler, Michael; Burleigh, Gordon; Sessa, Emily.GoFlag
Target Enrichment
polyploidy
apomixis
Ferns
July 28th 1:15 pm/Discussion

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